Variant CNV_M1_HG19_5_1034683_1038576

Location: chr5:1034683-1038576 (3.9Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.013

Genes Overlapped
NKD2 CDS protein naked cuticle homolog 2 isoform 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	65	1
CHB	0	0	76	2
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	66	3
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	68	15
YRI	0	1	69	1

AFR	0	1	135	4
AFR+	0	1	180	4
AMR	0	0	155	0
ASN	0	0	236	2
EUR	0	0	255	16

ALL	0	1	826	22
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	58	0
CHB	0	0	72	0
CHS	0	0	90	0
CLM	0	0	48	0
FIN	0	0	61	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	67	0
LWK	0	0	60	1
MXL	0	0	52	0
PUR	0	0	51	0
TSI	0	0	50	7
YRI	0	1	66	1

AFR	0	1	126	2
AFR+	0	1	171	2
AMR	0	0	151	0
ASN	0	0	229	0
EUR	0	0	229	7

ALL	0	1	780	9
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI