Variant CNV_M1_HG19_4_98354128_98358986

Location: chr4:98354128-98358986 (4.9Kb)
Site classification: Deletion
Variant DCN frequency: 0.183

Genes Overlapped
STPG2 INTRON sperm-tail PG-rich repeat-containing protein 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	4	41
CEU	3	19	44
CHB	1	20	57
CHS	0	25	66
CLM	0	2	47
FIN	0	9	53
GBR	4	16	34
IBS	0	0	6
JPT	0	13	56
LWK	0	1	68
MXL	3	2	49
PUR	0	8	44
TSI	2	21	60
YRI	0	6	65

AFR	0	7	133
AFR+	0	11	174
AMR	3	12	140
ASN	1	58	179
EUR	9	65	197

ALL	13	146	690
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	4	41
CEU	3	18	44
CHB	1	20	57
CHS	0	23	64
CLM	0	2	47
FIN	0	8	52
GBR	4	16	34
IBS	0	0	6
JPT	0	12	55
LWK	0	1	68
MXL	3	2	49
PUR	0	8	44
TSI	2	21	60
YRI	0	6	65

AFR	0	7	133
AFR+	0	11	174
AMR	3	12	140
ASN	1	55	176
EUR	9	63	196

ALL	13	141	686
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI