Variant CNV_M1_HG19_4_49489363_49512121

Location: chr4:49489363-49512121 (22Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.275
Genes overlapped: None


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	3	20	17	5	0	0
CEU	1	7	53	4	1	0	0
CHB	1	14	57	6	0	0	0
CHS	2	12	62	15	0	0	0
CLM	0	2	41	5	0	1	0
FIN	2	10	48	2	0	0	0
GBR	1	4	48	0	1	0	0
IBS	1	0	3	2	0	0	0
JPT	0	4	60	5	0	0	0
LWK	0	15	30	18	5	1	0
MXL	0	10	39	5	0	0	0
PUR	0	9	40	3	0	0	0
TSI	0	7	64	12	0	0	0
YRI	0	10	25	24	11	0	1

AFR	0	25	55	42	16	1	1
AFR+	0	28	75	59	21	1	1
AMR	0	21	120	13	0	1	0
ASN	3	30	179	26	0	0	0
EUR	5	28	216	20	2	0	0

ALL	8	107	590	118	23	2	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	3	18	11	4	0	0
CEU	1	7	48	3	1	0	0
CHB	1	14	56	5	0	0	0
CHS	2	10	58	10	0	0	0
CLM	0	2	40	4	0	0	0
FIN	2	10	48	1	0	0	0
GBR	1	4	48	0	0	0	0
IBS	1	0	3	1	0	0	0
JPT	0	4	58	4	0	0	0
LWK	0	14	27	10	2	1	0
MXL	0	10	38	5	0	0	0
PUR	0	8	37	3	0	0	0
TSI	0	7	64	10	0	0	0
YRI	0	10	23	21	7	0	1

AFR	0	24	50	31	9	1	1
AFR+	0	27	68	42	13	1	1
AMR	0	20	115	12	0	0	0
ASN	3	28	172	19	0	0	0
EUR	5	28	211	15	1	0	0

ALL	8	103	566	88	14	1	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI