Variant CNV_M1_HG19_3_2258040_2497618

Location: chr3:2258040-2497618 (239Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.002

Genes Overlapped
CNTN4 EXON contactin-4 isoform c


1000 Genomes Phase 1


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Diploid copy number distribution 
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	1	65	0
CHB	0	0	77	1
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	83	0
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	0	185	0
AMR	0	0	155	0
ASN	0	0	237	1
EUR	0	1	270	0

ALL	0	1	847	1
Diploid copy number distribution (95% confident) 
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	1	65	0
CHB	0	0	77	1
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	83	0
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	0	185	0
AMR	0	0	155	0
ASN	0	0	237	1
EUR	0	1	270	0

ALL	0	1	847	1

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI