Variant CNV_M1_HG19_3_197547453_197603657

Location: chr3:197547453-197603657 (56Kb)
Site classification: Duplication
Variant DCN frequency: 0.002

Genes Overlapped
LRCH3 CDS leucine-rich repeat and calponin homology domain-containing protein 3 precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	83	0
YRI	0	0	70	1

AFR	0	0	139	1
AFR+	0	0	184	1
AMR	0	0	155	0
ASN	0	0	237	1
EUR	0	0	271	0

ALL	0	0	847	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	83	0
YRI	0	0	70	1

AFR	0	0	139	1
AFR+	0	0	184	1
AMR	0	0	155	0
ASN	0	0	237	1
EUR	0	0	271	0

ALL	0	0	847	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI