Variant CNV_M1_HG19_3_195421487_195446004

Location: chr3:195421487-195446004 (24Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.690
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9
ASW	0	0	7	16	17	5	0	0	0	0
CEU	0	0	5	19	24	14	2	1	1	0
CHB	0	0	1	9	21	33	13	1	0	0
CHS	0	0	1	11	28	31	19	1	0	0
CLM	0	0	3	10	17	12	5	2	0	0
FIN	0	0	8	17	24	9	4	0	0	0
GBR	0	0	7	19	12	12	4	0	0	0
IBS	0	0	1	4	0	1	0	0	0	0
JPT	0	0	2	11	27	18	7	4	0	0
LWK	0	0	6	31	22	9	0	1	0	0
MXL	0	0	3	10	14	13	8	4	0	2
PUR	0	0	7	15	17	12	1	0	0	0
TSI	0	0	15	24	23	17	3	1	0	0
YRI	0	0	15	28	17	9	1	1	0	0

AFR	0	0	21	59	39	18	1	2	0	0
AFR+	0	0	28	75	56	23	1	2	0	0
AMR	0	0	13	35	48	37	14	6	0	2
ASN	0	0	4	31	76	82	39	6	0	0
EUR	0	0	36	83	83	53	13	2	1	0

ALL	0	0	81	224	263	195	67	16	1	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9
ASW	0	0	7	15	15	5	0	0	0	0
CEU	0	0	5	19	24	14	2	1	1	0
CHB	0	0	1	9	20	33	13	1	0	0
CHS	0	0	1	11	28	28	16	1	0	0
CLM	0	0	3	10	17	12	4	1	0	0
FIN	0	0	8	17	22	7	4	0	0	0
GBR	0	0	7	19	12	12	3	0	0	0
IBS	0	0	1	4	0	1	0	0	0	0
JPT	0	0	2	11	26	17	6	4	0	0
LWK	0	0	6	30	21	9	0	1	0	0
MXL	0	0	3	10	14	12	6	4	0	2
PUR	0	0	7	15	16	7	0	0	0	0
TSI	0	0	15	24	21	17	3	1	0	0
YRI	0	0	15	28	17	9	1	1	0	0

AFR	0	0	21	58	38	18	1	2	0	0
AFR+	0	0	28	73	53	23	1	2	0	0
AMR	0	0	13	35	47	31	10	5	0	2
ASN	0	0	4	31	74	78	35	6	0	0
EUR	0	0	36	83	79	51	12	2	1	0

ALL	0	0	81	222	253	183	58	15	1	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI