Variant CNV_M1_HG19_3_189838074_189841491

Location: chr3:189838074-189841491 (3.4Kb)
Site classification: Deletion
Variant DCN frequency: 0.002

Genes Overlapped
LEPREL1 CDS prolyl 3-hydroxylase 2 precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	0	52
TSI	0	0	83
YRI	0	5	66

AFR	0	5	135
AFR+	0	5	180
AMR	0	0	155
ASN	0	0	238
EUR	0	0	271

ALL	0	5	844
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	68
MXL	0	0	54
PUR	0	0	52
TSI	0	0	83
YRI	0	2	66

AFR	0	2	134
AFR+	0	2	179
AMR	0	0	155
ASN	0	0	238
EUR	0	0	271

ALL	0	2	843
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI