Variant CNV_M1_HG19_3_182849379_182902281

Location: chr3:182849379-182902281 (52Kb)
Site classification: Duplication
Variant DCN frequency: 0.001

Genes Overlapped
LAMP3 CDS lysosome-associated membrane glycoprotein 3
MCF2L2 CDS probable guanine nucleotide exchange factor MCF2L2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	45	0	0
CEU	0	0	66	0	0
CHB	0	0	78	0	0
CHS	0	0	91	0	0
CLM	0	0	49	0	0
FIN	0	0	62	0	0
GBR	0	0	54	0	0
IBS	0	0	6	0	0
JPT	0	0	69	0	0
LWK	0	0	68	0	1
MXL	0	0	54	0	0
PUR	0	0	52	0	0
TSI	0	0	83	0	0
YRI	0	0	71	0	0

AFR	0	0	139	0	1
AFR+	0	0	184	0	1
AMR	0	0	155	0	0
ASN	0	0	238	0	0
EUR	0	0	271	0	0

ALL	0	0	848	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	45	0	0
CEU	0	0	66	0	0
CHB	0	0	78	0	0
CHS	0	0	91	0	0
CLM	0	0	49	0	0
FIN	0	0	62	0	0
GBR	0	0	54	0	0
IBS	0	0	6	0	0
JPT	0	0	69	0	0
LWK	0	0	68	0	1
MXL	0	0	54	0	0
PUR	0	0	52	0	0
TSI	0	0	83	0	0
YRI	0	0	71	0	0

AFR	0	0	139	0	1
AFR+	0	0	184	0	1
AMR	0	0	155	0	0
ASN	0	0	238	0	0
EUR	0	0	271	0	0

ALL	0	0	848	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI