Variant CNV_M1_HG19_3_173239479_173290793

Location: chr3:173239479-173290793 (51Kb)
Site classification: Duplication
Variant DCN frequency: 0.024

Genes Overlapped
NLGN1 INTRON neuroligin-1


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	42	3
CEU	0	0	63	3
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	50	4
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	0	49	5
PUR	0	0	50	2
TSI	0	0	80	3
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	0	182	3
AMR	0	0	148	7
ASN	0	0	238	0
EUR	0	0	261	10

ALL	0	0	829	20
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	42	3
CEU	0	0	63	3
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	50	4
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	0	49	5
PUR	0	0	50	2
TSI	0	0	80	3
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	0	182	3
AMR	0	0	148	7
ASN	0	0	238	0
EUR	0	0	261	10

ALL	0	0	829	20
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI