Variant CNV_M1_HG19_3_131989238_131994968

Location: chr3:131989238-131994968 (5.7Kb)
Site classification: Deletion
Variant DCN frequency: 0.441

Genes Overlapped
CPNE4 INTRON copine-4


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	17	28
CEU	5	30	31
CHB	7	18	53
CHS	6	35	50
CLM	5	24	20
FIN	2	20	40
GBR	7	23	24
IBS	2	4	0
JPT	4	32	33
LWK	1	18	50
MXL	10	23	21
PUR	4	21	27
TSI	5	34	44
YRI	1	18	52

AFR	2	36	102
AFR+	2	53	130
AMR	19	68	68
ASN	17	85	136
EUR	21	111	139

ALL	59	317	473
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	17	28
CEU	5	30	31
CHB	7	18	53
CHS	6	35	50
CLM	5	23	20
FIN	2	19	40
GBR	7	23	24
IBS	2	4	0
JPT	4	32	33
LWK	1	17	49
MXL	10	23	20
PUR	4	21	27
TSI	5	34	44
YRI	1	17	52

AFR	2	34	101
AFR+	2	51	129
AMR	19	67	67
ASN	17	85	136
EUR	21	110	139

ALL	59	313	471
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI