Variant CNV_M1_HG19_3_116564479_116567765

Location: chr3:116564479-116567765 (3.3Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.006

Genes Overlapped
LSAMP INTRON limbic system-associated membrane protein precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	1	90	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	83	0
YRI	0	0	67	4

AFR	0	0	136	4
AFR+	0	0	181	4
AMR	0	0	155	0
ASN	0	1	236	1
EUR	0	0	271	0

ALL	0	1	843	5
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	44	0
CEU	0	0	66	0
CHB	0	0	77	0
CHS	0	1	90	0
CLM	0	0	49	0
FIN	0	0	61	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	68	0
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	81	0
YRI	0	0	67	4

AFR	0	0	136	4
AFR+	0	0	180	4
AMR	0	0	155	0
ASN	0	1	235	0
EUR	0	0	268	0

ALL	0	1	838	4
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI