Variant CNV_M1_HG19_2_77358520_77367096

Location: chr2:77358520-77367096 (8.6Kb)
Site classification: Deletion
Variant DCN frequency: 0.002

Genes Overlapped
LRRTM4 INTRON leucine-rich repeat transmembrane neuronal protein 4 isoform a precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	1	53	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	1	53	0
PUR	0	0	51	1
TSI	0	0	83	0
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	0	185	0
AMR	0	1	153	1
ASN	0	0	238	0
EUR	0	1	270	0

ALL	0	2	846	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	1	52
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	1	53
PUR	0	0	51
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	0	185
AMR	0	1	153
ASN	0	0	238
EUR	0	1	269

ALL	0	2	845
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI