Variant CNV_M1_HG19_2_125435115_125438692

Location: chr2:125435115-125438692 (3.6Kb)
Site classification: Deletion
Variant DCN frequency: 0.020

Genes Overlapped
CNTNAP5 INTRON contactin-associated protein-like 5 precursor


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	7	42
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	8	46
PUR	0	2	50
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	0	185
AMR	0	17	138
ASN	0	0	238
EUR	0	0	271

ALL	0	17	832
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	7	41
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	8	46
PUR	0	2	49
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	0	185
AMR	0	17	136
ASN	0	0	238
EUR	0	0	271

ALL	0	17	830
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI