Variant CNV_M1_HG19_2_110942999_111004000

Location: chr2:110942999-111004000 (61Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.016

Genes Overlapped
NPHP1 CDS nephrocystin-1


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	1	43	1
CEU	0	0	66	0
CHB	0	2	75	1
CHS	0	2	89	0
CLM	0	0	49	0
FIN	0	0	61	1
GBR	0	2	52	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	2	49	1
TSI	0	0	83	0
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	1	183	1
AMR	0	2	152	1
ASN	0	4	232	2
EUR	0	2	268	1

ALL	0	9	835	5
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	1	43	1
CEU	0	0	66	0
CHB	0	2	75	1
CHS	0	2	89	0
CLM	0	0	49	0
FIN	0	0	61	1
GBR	0	2	52	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	2	49	1
TSI	0	0	83	0
YRI	0	0	71	0

AFR	0	0	140	0
AFR+	0	1	183	1
AMR	0	2	152	1
ASN	0	4	232	2
EUR	0	2	268	1

ALL	0	9	835	5
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI