Variant CNV_M1_HG19_21_10956567_11007372
Location: chr21:10956567-11007372 (50Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.114
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.114
Genes Overlapped
| TPTE | CDS | putative tyrosine-protein phosphatase TPTE isoform alpha |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6
ASW 0 0 0 4 38 3 0
CEU 0 0 2 10 53 1 0
CHB 0 0 0 1 75 1 1
CHS 0 0 0 0 85 5 1
CLM 0 0 2 4 41 2 0
FIN 0 0 0 9 52 1 0
GBR 0 0 0 6 47 1 0
IBS 0 0 0 2 3 1 0
JPT 0 0 0 0 66 3 0
LWK 0 0 0 4 64 1 0
MXL 0 0 0 9 44 1 0
PUR 0 0 0 3 43 6 0
TSI 0 0 1 8 69 5 0
YRI 0 0 0 9 62 0 0
AFR 0 0 0 13 126 1 0
AFR+ 0 0 0 17 164 4 0
AMR 0 0 2 16 128 9 0
ASN 0 0 0 1 226 9 2
EUR 0 0 3 35 224 9 0
ALL 0 0 5 69 742 31 2
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6
ASW 0 0 0 3 38 3 0
CEU 0 0 2 10 53 1 0
CHB 0 0 0 1 74 0 1
CHS 0 0 0 0 84 4 1
CLM 0 0 2 4 41 2 0
FIN 0 0 0 8 50 0 0
GBR 0 0 0 6 47 1 0
IBS 0 0 0 1 3 1 0
JPT 0 0 0 0 65 3 0
LWK 0 0 0 2 64 1 0
MXL 0 0 0 8 43 1 0
PUR 0 0 0 2 33 2 0
TSI 0 0 1 8 69 5 0
YRI 0 0 0 9 62 0 0
AFR 0 0 0 11 126 1 0
AFR+ 0 0 0 14 164 4 0
AMR 0 0 2 14 117 5 0
ASN 0 0 0 1 223 7 2
EUR 0 0 3 33 222 8 0
ALL 0 0 5 62 726 24 2
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI