Variant CNV_M1_HG19_20_52331474_52338370

Location: chr20:52331474-52338370 (6.9Kb)
Site classification: Duplication
Variant DCN frequency: 0.041
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	36	8	1
CEU	0	0	66	0	0
CHB	0	0	78	0	0
CHS	0	0	91	0	0
CLM	0	0	47	2	0
FIN	0	0	62	0	0
GBR	0	0	54	0	0
IBS	0	0	6	0	0
JPT	0	0	69	0	0
LWK	0	0	50	17	2
MXL	0	0	53	1	0
PUR	0	0	49	3	0
TSI	0	0	83	0	0
YRI	0	0	53	15	3

AFR	0	0	103	32	5
AFR+	0	0	139	40	6
AMR	0	0	149	6	0
ASN	0	0	238	0	0
EUR	0	0	271	0	0

ALL	0	0	797	46	6
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	31	5	1
CEU	0	0	64	0	0
CHB	0	0	76	0	0
CHS	0	0	90	0	0
CLM	0	0	42	0	0
FIN	0	0	60	0	0
GBR	0	0	52	0	0
IBS	0	0	4	0	0
JPT	0	0	67	0	0
LWK	0	0	40	8	0
MXL	0	0	47	1	0
PUR	0	0	48	2	0
TSI	0	0	83	0	0
YRI	0	0	46	13	2

AFR	0	0	86	21	2
AFR+	0	0	117	26	3
AMR	0	0	137	3	0
ASN	0	0	233	0	0
EUR	0	0	263	0	0

ALL	0	0	750	29	3
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI