Variant CNV_M1_HG19_20_5013474_5017860

Location: chr20:5013474-5017860 (4.4Kb)
Site classification: Deletion
Variant DCN frequency: 0.064
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	2	43
CEU	0	2	64
CHB	1	7	70
CHS	0	10	81
CLM	0	6	43
FIN	0	4	58
GBR	1	3	50
IBS	0	0	6
JPT	0	6	63
LWK	0	3	66
MXL	0	4	50
PUR	0	5	47
TSI	0	4	79
YRI	0	4	67

AFR	0	7	133
AFR+	0	9	176
AMR	0	15	140
ASN	1	23	214
EUR	1	13	257

ALL	2	60	787
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	1	42
CEU	0	2	64
CHB	1	7	69
CHS	0	10	81
CLM	0	3	42
FIN	0	3	56
GBR	1	3	50
IBS	0	0	6
JPT	0	6	62
LWK	0	2	65
MXL	0	3	50
PUR	0	3	47
TSI	0	4	79
YRI	0	4	67

AFR	0	6	132
AFR+	0	7	174
AMR	0	9	139
ASN	1	23	212
EUR	1	12	255

ALL	2	51	780
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI