Variant CNV_M1_HG19_1_86400732_86404509

Location: chr1:86400732-86404509 (3.8Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.278

Genes Overlapped
COL24A1 INTRON collagen alpha-1(XXIV) chain precursor


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	2	8	35	0
CEU	2	10	54	0
CHB	2	26	50	0
CHS	5	29	57	0
CLM	1	13	35	0
FIN	0	6	56	0
GBR	0	9	45	0
IBS	0	2	4	0
JPT	4	27	37	1
LWK	0	16	52	1
MXL	0	17	37	0
PUR	0	14	38	0
TSI	3	28	52	0
YRI	1	8	61	1

AFR	1	24	113	2
AFR+	3	32	148	2
AMR	1	44	110	0
ASN	11	82	144	1
EUR	5	55	211	0

ALL	20	213	613	3
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	2	8	35	0
CEU	2	10	53	0
CHB	2	26	50	0
CHS	5	29	57	0
CLM	1	13	35	0
FIN	0	6	56	0
GBR	0	9	44	0
IBS	0	2	4	0
JPT	4	27	37	1
LWK	0	16	50	0
MXL	0	17	37	0
PUR	0	14	38	0
TSI	3	28	52	0
YRI	1	8	60	0

AFR	1	24	110	0
AFR+	3	32	145	0
AMR	1	44	110	0
ASN	11	82	144	1
EUR	5	55	209	0

ALL	20	213	608	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI