Variant CNV_M1_HG19_1_42648721_42652648

Location: chr1:42648721-42652648 (3.9Kb)
Site classification: Deletion
Variant DCN frequency: 0.005

Genes Overlapped
FOXJ3 INTRON forkhead box protein J3


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	1	51
TSI	0	0	83
YRI	0	3	68

AFR	0	3	137
AFR+	0	3	182
AMR	0	1	154
ASN	0	0	238
EUR	0	0	271

ALL	0	4	845
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	77
CHS	0	0	90
CLM	0	0	49
FIN	0	0	62
GBR	0	0	53
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	1	51
TSI	0	0	83
YRI	0	3	68

AFR	0	3	137
AFR+	0	3	182
AMR	0	1	154
ASN	0	0	236
EUR	0	0	270

ALL	0	4	842
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI