Variant CNV_M1_HG19_1_16429433_16435186

Location: chr1:16429433-16435186 (5.8Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.024
Genes overlapped: None


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	7	38	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	3	46	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	1	9	59	0
MXL	0	0	54	0
PUR	0	2	50	0
TSI	0	0	83	0
YRI	1	7	63	0

AFR	2	16	122	0
AFR+	2	23	160	0
AMR	0	5	150	0
ASN	0	0	237	1
EUR	0	0	271	0

ALL	2	28	818	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	6	38	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	1	46	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	68	1
LWK	0	4	57	0
MXL	0	0	54	0
PUR	0	1	50	0
TSI	0	0	83	0
YRI	1	6	62	0

AFR	1	10	119	0
AFR+	1	16	157	0
AMR	0	2	150	0
ASN	0	0	237	1
EUR	0	0	271	0

ALL	1	18	815	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI