Variant CNV_M1_HG19_1_16347767_16366847

Location: chr1:16347767-16366847 (19Kb)
Site classification: Duplication
Variant DCN frequency: 0.038

Genes Overlapped
CLCNKA CDS chloride channel protein ClC-Ka isoform 3


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	37	8
CEU	0	1	65	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	60	9
MXL	0	0	54	0
PUR	0	0	50	2
TSI	0	0	83	0
YRI	0	0	57	14

AFR	0	0	117	23
AFR+	0	0	154	31
AMR	0	0	153	2
ASN	0	0	238	0
EUR	0	1	270	0

ALL	0	1	815	33
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	37	8
CEU	0	0	64	0
CHB	0	0	77	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	53	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	59	9
MXL	0	0	54	0
PUR	0	0	49	1
TSI	0	0	83	0
YRI	0	0	57	14

AFR	0	0	116	23
AFR+	0	0	153	31
AMR	0	0	152	1
ASN	0	0	237	0
EUR	0	0	268	0

ALL	0	0	810	32
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI