Variant CNV_M1_HG19_1_16186344_16190960
Location: chr1:16186344-16190960 (4.6Kb)
Site classification: Deletion
Variant DCN frequency: 0.005
Genes Overlapped
Site classification: Deletion
Variant DCN frequency: 0.005
Genes Overlapped
| SPEN | INTRON | msx2-interacting protein |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4
ASW 0 0 45 0 0
CEU 0 0 65 1 0
CHB 0 3 75 0 0
CHS 0 1 90 0 0
CLM 0 0 48 1 0
FIN 0 0 62 0 0
GBR 0 0 54 0 0
IBS 0 0 6 0 0
JPT 0 0 69 0 0
LWK 0 0 69 0 0
MXL 0 0 53 0 1
PUR 0 0 52 0 0
TSI 0 0 83 0 0
YRI 0 0 71 0 0
AFR 0 0 140 0 0
AFR+ 0 0 185 0 0
AMR 0 0 153 1 1
ASN 0 4 234 0 0
EUR 0 0 270 1 0
ALL 0 4 842 2 1
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2
ASW 0 0 45
CEU 0 0 65
CHB 0 3 73
CHS 0 1 89
CLM 0 0 48
FIN 0 0 62
GBR 0 0 54
IBS 0 0 6
JPT 0 0 69
LWK 0 0 68
MXL 0 0 53
PUR 0 0 50
TSI 0 0 83
YRI 0 0 71
AFR 0 0 139
AFR+ 0 0 184
AMR 0 0 151
ASN 0 4 231
EUR 0 0 270
ALL 0 4 836
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI