Variant CNV_M1_HG19_1_161488931_161520018

Location: chr1:161488931-161520018 (31Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.046

Genes Overlapped
FCGR2A EXON low affinity immunoglobulin gamma Fc region receptor II-a precursor
FCGR3A CDS low affinity immunoglobulin gamma Fc region receptor III-A precursor
HSPA6 GENE heat shock 70 kDa protein 6


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	44	1
CEU	0	2	62	2
CHB	0	2	71	5
CHS	0	0	88	3
CLM	0	1	47	1
FIN	0	1	59	2
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	1	65	3
LWK	0	1	67	1
MXL	0	0	51	3
PUR	0	0	50	2
TSI	0	1	77	5
YRI	0	2	68	1

AFR	0	3	135	2
AFR+	0	3	179	3
AMR	0	1	148	6
ASN	0	3	224	11
EUR	0	4	258	9

ALL	0	11	809	29
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	44	1
CEU	0	2	62	2
CHB	0	2	71	5
CHS	0	0	87	3
CLM	0	1	47	1
FIN	0	1	59	2
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	1	65	3
LWK	0	1	67	1
MXL	0	0	51	3
PUR	0	0	50	2
TSI	0	1	77	4
YRI	0	2	68	1

AFR	0	3	135	2
AFR+	0	3	179	3
AMR	0	1	148	6
ASN	0	3	223	11
EUR	0	4	258	8

ALL	0	11	808	28
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI