Variant CNV_M1_HG19_1_152555523_152586878

Location: chr1:152555523-152586878 (31Kb)
Site classification: Deletion
Variant DCN frequency: 0.523

Genes Overlapped
LCE3B GENE late cornified envelope protein 3B
LCE3C GENE late cornified envelope protein 3C


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	7	18	20
CEU	26	30	10
CHB	31	39	8
CHS	48	38	5
CLM	17	26	6
FIN	24	30	8
GBR	27	24	3
IBS	0	5	1
JPT	22	31	16
LWK	10	39	20
MXL	13	30	11
PUR	22	19	11
TSI	32	44	7
YRI	7	32	32

AFR	17	71	52
AFR+	24	89	72
AMR	52	75	28
ASN	101	108	29
EUR	109	133	29

ALL	286	405	158
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	7	18	20
CEU	26	30	10
CHB	31	39	8
CHS	48	38	5
CLM	17	26	6
FIN	24	30	8
GBR	27	24	3
IBS	0	5	1
JPT	22	31	16
LWK	10	39	20
MXL	13	30	11
PUR	22	19	11
TSI	32	44	7
YRI	7	32	32

AFR	17	71	52
AFR+	24	89	72
AMR	52	75	28
ASN	101	108	29
EUR	109	133	29

ALL	286	405	158
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI