Variant CNV_M1_HG19_1_104103087_104143945

Location: chr1:104103087-104143945 (40Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.105

Genes Overlapped
AMY2B CDS amylase, alpha 2B (pancreatic) precursor


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	39	0	4	1	1
CEU	0	0	57	9	0	0	0
CHB	0	0	77	1	0	0	0
CHS	0	0	91	0	0	0	0
CLM	0	0	44	5	0	0	0
FIN	0	0	55	6	1	0	0
GBR	0	0	46	8	0	0	0
IBS	0	0	6	0	0	0	0
JPT	0	0	69	0	0	0	0
LWK	0	0	58	7	3	1	0
MXL	0	0	48	5	0	1	0
PUR	0	0	44	8	0	0	0
TSI	0	0	67	16	0	0	0
YRI	0	0	58	9	2	2	0

AFR	0	0	116	16	5	3	0
AFR+	0	0	155	16	9	4	1
AMR	0	0	136	18	0	1	0
ASN	0	0	237	1	0	0	0
EUR	0	0	231	39	1	0	0

ALL	0	0	759	74	10	5	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	39	0	4	1	1
CEU	0	0	57	9	0	0	0
CHB	0	0	77	1	0	0	0
CHS	0	0	91	0	0	0	0
CLM	0	0	44	5	0	0	0
FIN	0	0	55	6	1	0	0
GBR	0	0	46	8	0	0	0
IBS	0	0	6	0	0	0	0
JPT	0	0	69	0	0	0	0
LWK	0	0	58	7	2	1	0
MXL	0	0	48	5	0	1	0
PUR	0	0	44	8	0	0	0
TSI	0	0	67	16	0	0	0
YRI	0	0	58	9	2	2	0

AFR	0	0	116	16	4	3	0
AFR+	0	0	155	16	8	4	1
AMR	0	0	136	18	0	1	0
ASN	0	0	237	1	0	0	0
EUR	0	0	231	39	1	0	0

ALL	0	0	759	74	9	5	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI