Variant CNV_M1_HG19_19_56866227_56869865

Location: chr19:56866227-56869865 (3.6Kb)
Site classification: Deletion
Variant DCN frequency: 0.145

Genes Overlapped
ZSCAN5A INTRON zinc finger and SCAN domain-containing protein 5A


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	12	33
CEU	0	7	59
CHB	0	2	76
CHS	0	1	90
CLM	0	7	42
FIN	0	10	52
GBR	0	14	40
IBS	0	1	5
JPT	0	2	67
LWK	5	16	48
MXL	0	6	48
PUR	0	6	46
TSI	2	16	65
YRI	2	20	49

AFR	7	36	97
AFR+	7	48	130
AMR	0	19	136
ASN	0	5	233
EUR	2	48	221

ALL	9	120	720
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	11	33
CEU	0	7	59
CHB	0	2	75
CHS	0	1	90
CLM	0	6	42
FIN	0	9	52
GBR	0	14	40
IBS	0	1	5
JPT	0	2	67
LWK	4	16	48
MXL	0	5	48
PUR	0	6	46
TSI	2	15	65
YRI	2	19	49

AFR	6	35	97
AFR+	6	46	130
AMR	0	17	136
ASN	0	5	232
EUR	2	46	221

ALL	8	114	719
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI