Variant CNV_M1_HG19_19_54555264_54560439
Location: chr19:54555264-54560439 (5.2Kb)
Site classification: Deletion
Variant DCN frequency: 0.375
Genes Overlapped
Site classification: Deletion
Variant DCN frequency: 0.375
Genes Overlapped
| VSTM1 | CDS | V-set and transmembrane domain-containing protein 1 precursor |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3
ASW 3 11 31 0
CEU 4 26 36 0
CHB 0 11 67 0
CHS 1 20 70 0
CLM 3 20 26 0
FIN 3 24 35 0
GBR 1 21 32 0
IBS 1 3 2 0
JPT 1 22 46 0
LWK 7 24 38 0
MXL 1 20 33 0
PUR 6 18 28 0
TSI 5 33 44 1
YRI 4 26 41 0
AFR 11 50 79 0
AFR+ 14 61 110 0
AMR 10 58 87 0
ASN 2 53 183 0
EUR 14 107 149 1
ALL 40 279 529 1
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2
ASW 3 11 31
CEU 4 26 36
CHB 0 10 67
CHS 1 19 69
CLM 3 20 25
FIN 3 23 35
GBR 1 20 32
IBS 1 3 2
JPT 1 22 44
LWK 7 24 38
MXL 1 20 33
PUR 6 18 28
TSI 5 33 44
YRI 4 26 41
AFR 11 50 79
AFR+ 14 61 110
AMR 10 58 86
ASN 2 51 180
EUR 14 105 149
ALL 40 275 525
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI