Variant CNV_M1_HG19_19_43655216_43699309

Location: chr19:43655216-43699309 (44Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.059

Genes Overlapped
PSG4 CDS pregnancy-specific beta-1-glycoprotein 4 isoform 3 precursor
PSG5 GENE pregnancy-specific beta-1-glycoprotein 5 precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	4	40	1	0
CEU	0	2	64	0	0
CHB	0	3	74	1	0
CHS	0	0	90	1	0
CLM	0	3	44	2	0
FIN	0	2	60	0	0
GBR	0	1	52	1	0
IBS	0	1	5	0	0
JPT	0	2	67	0	0
LWK	0	1	66	2	0
MXL	0	1	47	4	2
PUR	0	2	49	1	0
TSI	1	6	76	0	0
YRI	0	6	64	1	0

AFR	0	7	130	3	0
AFR+	0	11	170	4	0
AMR	0	6	140	7	2
ASN	0	5	231	2	0
EUR	1	12	257	1	0

ALL	1	34	798	14	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	4	40	1	0
CEU	0	2	64	0	0
CHB	0	2	74	1	0
CHS	0	0	90	1	0
CLM	0	3	44	2	0
FIN	0	2	60	0	0
GBR	0	1	52	1	0
IBS	0	1	5	0	0
JPT	0	2	67	0	0
LWK	0	1	66	2	0
MXL	0	1	47	4	2
PUR	0	2	49	1	0
TSI	1	6	76	0	0
YRI	0	6	64	1	0

AFR	0	7	130	3	0
AFR+	0	11	170	4	0
AMR	0	6	140	7	2
ASN	0	4	231	2	0
EUR	1	12	257	1	0

ALL	1	33	798	14	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI