Variant CNV_M1_HG19_17_80317201_80321790

Location: chr17:80317201-80321790 (4.6Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.020

Genes Overlapped
TEX19 CDS testis-expressed sequence 19 protein


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9
ASW	0	0	45	0	0	0	0	0	0	0
CEU	0	0	58	6	2	0	0	0	0	0
CHB	0	0	77	1	0	0	0	0	0	0
CHS	0	0	91	0	0	0	0	0	0	0
CLM	0	0	46	0	3	0	0	0	0	0
FIN	0	0	55	3	3	0	0	0	0	1
GBR	0	0	48	5	1	0	0	0	0	0
IBS	0	0	5	1	0	0	0	0	0	0
JPT	0	0	69	0	0	0	0	0	0	0
LWK	0	0	69	0	0	0	0	0	0	0
MXL	0	0	49	0	5	0	0	0	0	0
PUR	0	0	48	2	2	0	0	0	0	0
TSI	0	0	82	1	0	0	0	0	0	0
YRI	0	0	71	0	0	0	0	0	0	0

AFR	0	0	140	0	0	0	0	0	0	0
AFR+	0	0	185	0	0	0	0	0	0	0
AMR	0	0	143	2	10	0	0	0	0	0
ASN	0	0	237	1	0	0	0	0	0	0
EUR	0	0	248	16	6	0	0	0	0	1

ALL	0	0	813	19	16	0	0	0	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9
ASW	0	0	45	0	0	0	0	0	0	0
CEU	0	0	58	4	2	0	0	0	0	0
CHB	0	0	75	0	0	0	0	0	0	0
CHS	0	0	83	0	0	0	0	0	0	0
CLM	0	0	42	0	2	0	0	0	0	0
FIN	0	0	48	0	0	0	0	0	0	1
GBR	0	0	45	2	0	0	0	0	0	0
IBS	0	0	5	0	0	0	0	0	0	0
JPT	0	0	69	0	0	0	0	0	0	0
LWK	0	0	66	0	0	0	0	0	0	0
MXL	0	0	46	0	2	0	0	0	0	0
PUR	0	0	46	0	2	0	0	0	0	0
TSI	0	0	82	1	0	0	0	0	0	0
YRI	0	0	70	0	0	0	0	0	0	0

AFR	0	0	136	0	0	0	0	0	0	0
AFR+	0	0	181	0	0	0	0	0	0	0
AMR	0	0	134	0	6	0	0	0	0	0
ASN	0	0	227	0	0	0	0	0	0	0
EUR	0	0	238	7	2	0	0	0	0	1

ALL	0	0	780	7	8	0	0	0	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI