Variant CNV_M1_HG19_17_44286626_44342496

Location: chr17:44286626-44342496 (55Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.274

Genes Overlapped
KANSL1 EXON KAT8 regulatory NSL complex subunit 1 isoform 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	32	12	1	0	0
CEU	0	0	23	29	14	0	0
CHB	0	0	78	0	0	0	0
CHS	0	0	91	0	0	0	0
CLM	0	0	21	13	12	2	1
FIN	0	0	34	22	6	0	0
GBR	0	0	22	20	12	0	0
IBS	0	0	2	1	3	0	0
JPT	0	0	68	1	0	0	0
LWK	0	0	69	0	0	0	0
MXL	0	0	31	15	7	1	0
PUR	0	0	29	18	5	0	0
TSI	0	0	24	36	21	2	0
YRI	0	0	71	0	0	0	0

AFR	0	0	140	0	0	0	0
AFR+	0	0	172	12	1	0	0
AMR	0	0	81	46	24	3	1
ASN	0	0	237	1	0	0	0
EUR	0	0	105	108	56	2	0

ALL	0	0	595	167	81	5	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	27	8	0	0
CEU	0	0	23	29	14	0
CHB	0	0	78	0	0	0
CHS	0	0	91	0	0	0
CLM	0	0	21	11	7	2
FIN	0	0	34	20	6	0
GBR	0	0	20	15	10	0
IBS	0	0	1	1	1	0
JPT	0	0	68	1	0	0
LWK	0	0	68	0	0	0
MXL	0	0	29	10	6	0
PUR	0	0	27	16	4	0
TSI	0	0	24	35	21	2
YRI	0	0	71	0	0	0

AFR	0	0	139	0	0	0
AFR+	0	0	166	8	0	0
AMR	0	0	77	37	17	2
ASN	0	0	237	1	0	0
EUR	0	0	102	100	52	2

ALL	0	0	582	146	69	4
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI