Variant CNV_M1_HG19_17_16710818_16724595

Location: chr17:16710818-16724595 (13Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.563
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	7	6	16	14	2
CEU	0	2	24	25	15
CHB	3	16	50	8	1
CHS	3	23	62	3	0
CLM	1	4	20	21	3
FIN	0	0	23	29	10
GBR	0	1	19	26	8
IBS	0	0	2	4	0
JPT	1	28	37	3	0
LWK	10	22	24	11	2
MXL	0	7	20	21	6
PUR	2	8	21	15	6
TSI	0	6	23	40	14
YRI	12	30	24	4	1

AFR	22	52	48	15	3
AFR+	29	58	64	29	5
AMR	3	19	61	57	15
ASN	7	67	149	14	1
EUR	0	9	91	124	47

ALL	39	153	365	224	68
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	7	6	15	13	1
CEU	0	2	24	25	15
CHB	3	15	49	8	1
CHS	3	22	60	2	0
CLM	1	4	20	21	2
FIN	0	0	23	23	6
GBR	0	1	17	24	6
IBS	0	0	2	4	0
JPT	1	28	37	3	0
LWK	10	21	22	9	2
MXL	0	6	19	21	6
PUR	2	8	21	14	6
TSI	0	6	23	40	14
YRI	12	30	24	4	1

AFR	22	51	46	13	3
AFR+	29	57	61	26	4
AMR	3	18	60	56	14
ASN	7	65	146	13	1
EUR	0	9	89	116	41

ALL	39	149	356	211	60
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI