Variant CNV_M1_HG19_16_75532570_75576558

Location: chr16:75532570-75576558 (43Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.032

Genes Overlapped
CHST5 GENE carbohydrate sulfotransferase 5
RP11-77K12.7 CDS NA
TMEM231 CDS transmembrane protein 231 isoform 2


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	1	43	1	0
CEU	0	0	64	2	0
CHB	0	0	75	3	0
CHS	0	0	89	2	0
CLM	0	0	49	0	0
FIN	0	0	61	0	1
GBR	0	0	54	0	0
IBS	0	0	4	1	1
JPT	0	0	67	2	0
LWK	0	0	69	0	0
MXL	0	0	54	0	0
PUR	0	0	49	3	0
TSI	0	0	81	2	0
YRI	0	0	63	8	0

AFR	0	0	132	8	0
AFR+	0	1	175	9	0
AMR	0	0	152	3	0
ASN	0	0	231	7	0
EUR	0	0	264	5	2

ALL	0	1	822	24	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	1	43	1	0
CEU	0	0	64	2	0
CHB	0	0	75	3	0
CHS	0	0	89	2	0
CLM	0	0	49	0	0
FIN	0	0	61	0	1
GBR	0	0	54	0	0
IBS	0	0	4	1	1
JPT	0	0	67	2	0
LWK	0	0	69	0	0
MXL	0	0	54	0	0
PUR	0	0	49	3	0
TSI	0	0	81	2	0
YRI	0	0	63	8	0

AFR	0	0	132	8	0
AFR+	0	1	175	9	0
AMR	0	0	152	3	0
ASN	0	0	231	7	0
EUR	0	0	264	5	2

ALL	0	1	822	24	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI