Variant CNV_M1_HG19_16_72086198_72113261

Location: chr16:72086198-72113261 (27Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.073

Genes Overlapped
HP GENE haptoglobin precursor
HPR GENE hydroxypyruvate reductase
TXNL4B INTRON thioredoxin-like protein 4B


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	36	1	1	7	0
CEU	0	0	66	0	0	0	0
CHB	0	4	74	0	0	0	0
CHS	0	8	83	0	0	0	0
CLM	0	0	47	0	1	1	0
FIN	0	0	62	0	0	0	0
GBR	0	0	54	0	0	0	0
IBS	0	0	6	0	0	0	0
JPT	0	2	67	0	0	0	0
LWK	0	0	53	2	5	9	0
MXL	0	0	51	2	0	1	0
PUR	0	0	51	0	0	1	0
TSI	0	0	83	0	0	0	0
YRI	0	0	53	0	4	12	2

AFR	0	0	106	2	9	21	2
AFR+	0	0	142	3	10	28	2
AMR	0	0	149	2	1	3	0
ASN	0	14	224	0	0	0	0
EUR	0	0	271	0	0	0	0

ALL	0	14	786	5	11	31	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	36	0	1	7	0
CEU	0	0	66	0	0	0	0
CHB	0	4	74	0	0	0	0
CHS	0	8	83	0	0	0	0
CLM	0	0	47	0	1	1	0
FIN	0	0	62	0	0	0	0
GBR	0	0	54	0	0	0	0
IBS	0	0	6	0	0	0	0
JPT	0	2	67	0	0	0	0
LWK	0	0	53	2	5	9	0
MXL	0	0	51	2	0	1	0
PUR	0	0	51	0	0	1	0
TSI	0	0	83	0	0	0	0
YRI	0	0	53	0	4	12	2

AFR	0	0	106	2	9	21	2
AFR+	0	0	142	2	10	28	2
AMR	0	0	149	2	1	3	0
ASN	0	14	224	0	0	0	0
EUR	0	0	271	0	0	0	0

ALL	0	14	786	4	11	31	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI