Variant CNV_M1_HG19_15_21893108_21946253

Location: chr15:21893108-21946253 (53Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.744
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9	CN10	CN11
ASW	0	0	0	6	1	6	13	6	10	1	2	0
CEU	0	0	1	4	13	17	13	8	8	1	1	0
CHB	0	0	0	1	16	16	16	15	8	5	1	0
CHS	0	0	0	2	9	17	25	17	9	5	2	5
CLM	0	0	1	6	9	18	7	5	3	0	0	0
FIN	0	0	0	1	12	19	15	8	4	3	0	0
GBR	0	0	0	3	12	20	7	6	4	1	1	0
IBS	0	0	0	0	3	1	1	0	0	1	0	0
JPT	0	0	0	4	13	17	14	11	4	3	2	1
LWK	0	0	3	9	22	9	14	7	2	2	1	0
MXL	0	0	1	4	17	13	11	6	2	0	0	0
PUR	0	0	0	6	11	13	12	6	3	1	0	0
TSI	0	0	1	6	14	20	20	10	6	4	2	0
YRI	0	0	0	7	15	25	10	10	3	1	0	0

AFR	0	0	3	16	37	34	24	17	5	3	1	0
AFR+	0	0	3	22	38	40	37	23	15	4	3	0
AMR	0	0	2	16	37	44	30	17	8	1	0	0
ASN	0	0	0	7	38	50	55	43	21	13	5	6
EUR	0	0	2	14	54	77	56	32	22	10	4	0

ALL	0	0	7	59	167	211	178	115	66	28	12	6
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9	CN10	CN11
ASW	0	0	0	6	0	5	7	5	7	1	1	0
CEU	0	0	1	4	13	17	13	6	6	0	1	0
CHB	0	0	0	1	16	15	15	14	6	4	1	0
CHS	0	0	0	2	9	16	20	13	7	4	2	5
CLM	0	0	1	6	9	16	7	3	2	0	0	0
FIN	0	0	0	1	12	14	13	4	3	1	0	0
GBR	0	0	0	3	12	19	4	4	4	1	1	0
IBS	0	0	0	0	2	0	1	0	0	0	0	0
JPT	0	0	0	4	13	16	14	10	3	3	2	1
LWK	0	0	3	9	21	7	10	5	1	1	0	0
MXL	0	0	1	4	15	10	9	5	2	0	0	0
PUR	0	0	0	6	9	10	8	3	3	1	0	0
TSI	0	0	1	6	14	19	20	9	5	3	1	0
YRI	0	0	0	7	15	25	8	7	2	1	0	0

AFR	0	0	3	16	36	32	18	12	3	2	0	0
AFR+	0	0	3	22	36	37	25	17	10	3	1	0
AMR	0	0	2	16	33	36	24	11	7	1	0	0
ASN	0	0	0	7	38	47	49	37	16	11	5	6
EUR	0	0	2	14	53	69	51	23	18	5	3	0

ALL	0	0	7	59	160	189	149	88	51	20	9	6
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI