Variant CNV_M1_HG19_12_123182526_123198813

Location: chr12:123182526-123198813 (16Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.051

Genes Overlapped
HCAR1 EXON hydroxycarboxylic acid receptor 1
HCAR2 GENE hydroxycarboxylic acid receptor 2


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	1	62	3
CHB	0	0	66	12
CHS	0	0	77	14
CLM	0	0	49	0
FIN	0	1	60	1
GBR	0	0	53	1
IBS	0	0	6	0
JPT	0	0	53	16
LWK	0	0	69	0
MXL	0	0	53	1
PUR	0	0	52	0
TSI	0	0	81	2
YRI	0	0	69	2

AFR	0	0	138	2
AFR+	0	0	183	2
AMR	0	0	154	1
ASN	0	0	196	42
EUR	0	2	262	7

ALL	0	2	795	52
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	1	62	2
CHB	0	0	66	12
CHS	0	0	71	8
CLM	0	0	48	0
FIN	0	1	60	1
GBR	0	0	52	1
IBS	0	0	5	0
JPT	0	0	52	13
LWK	0	0	66	0
MXL	0	0	50	1
PUR	0	0	52	0
TSI	0	0	81	1
YRI	0	0	69	1

AFR	0	0	135	1
AFR+	0	0	180	1
AMR	0	0	150	1
ASN	0	0	189	33
EUR	0	2	260	5

ALL	0	2	779	40
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI