Variant CNV_M1_HG19_12_102102399_102107038
Location: chr12:102102399-102107038 (4.6Kb)
Site classification: Deletion
Variant DCN frequency: 0.194
Genes Overlapped
Site classification: Deletion
Variant DCN frequency: 0.194
Genes Overlapped
| CHPT1 | INTRON | cholinephosphotransferase 1 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2
ASW 1 2 42
CEU 1 17 48
CHB 1 17 60
CHS 6 18 67
CLM 3 10 36
FIN 0 8 54
GBR 2 11 41
IBS 0 3 3
JPT 1 13 55
LWK 0 0 69
MXL 0 20 34
PUR 0 10 42
TSI 1 17 65
YRI 0 2 69
AFR 0 2 138
AFR+ 1 4 180
AMR 3 40 112
ASN 8 48 182
EUR 4 56 211
ALL 16 148 685
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2
ASW 1 2 41
CEU 1 17 48
CHB 1 17 60
CHS 6 18 67
CLM 3 10 36
FIN 0 8 54
GBR 2 11 41
IBS 0 3 3
JPT 1 13 55
LWK 0 0 69
MXL 0 20 34
PUR 0 10 41
TSI 1 17 65
YRI 0 2 69
AFR 0 2 138
AFR+ 1 4 179
AMR 3 40 111
ASN 8 48 182
EUR 4 56 211
ALL 16 148 683
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI