Variant CNV_M1_HG19_10_135302167_135354957

Location: chr10:135302167-135354957 (52Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.042

Genes Overlapped
AL161645.2 GENE NA
CYP2E1 CDS cytochrome P450 2E1 precursor
SPRN INTRON shadow of prion protein precursor


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	41	3	0	1
CEU	0	0	64	2	0	0
CHB	0	0	77	0	1	0
CHS	0	0	88	3	0	0
CLM	0	0	47	2	0	0
FIN	0	0	61	1	0	0
GBR	0	0	54	0	0	0
IBS	0	0	6	0	0	0
JPT	0	0	67	2	0	0
LWK	0	0	64	5	0	0
MXL	0	0	52	2	0	0
PUR	0	0	49	3	0	0
TSI	0	0	79	4	0	0
YRI	0	0	64	6	1	0

AFR	0	0	128	11	1	0
AFR+	0	0	169	14	1	1
AMR	0	0	148	7	0	0
ASN	0	0	232	5	1	0
EUR	0	0	264	7	0	0

ALL	0	0	813	33	2	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	41	3	0	1
CEU	0	0	64	2	0	0
CHB	0	0	77	0	1	0
CHS	0	0	88	3	0	0
CLM	0	0	47	2	0	0
FIN	0	0	61	1	0	0
GBR	0	0	54	0	0	0
IBS	0	0	6	0	0	0
JPT	0	0	67	2	0	0
LWK	0	0	64	5	0	0
MXL	0	0	52	2	0	0
PUR	0	0	49	3	0	0
TSI	0	0	79	4	0	0
YRI	0	0	64	6	1	0

AFR	0	0	128	11	1	0
AFR+	0	0	169	14	1	1
AMR	0	0	148	7	0	0
ASN	0	0	232	5	1	0
EUR	0	0	264	7	0	0

ALL	0	0	813	33	2	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI