@include "atac/_sc_atac_analyzer_stages.mro"

call ATAC_RUN_GRAPH_CLUSTERING(
    matrix_h5          = "/home/benjames/data4/10X/pbmc_granulocyte_sorted_10k/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/MERGE_ATAC_RNA_MATRICES/fork0/join-u3b7f6eb558/files/atac.h5",
    factorization      = ["lsa"],
    reduced_data       = "/home/benjames/data4/10X/pbmc_granulocyte_sorted_10k/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_SC_ATAC_GEX_ANALYZER/_DIMENSION_REDUCER/_ATAC_DIMENSION_REDUCER/REDUCE_DIMENSIONS/fork0/join-u3b7f6eb8a8/files/reduced_data",
    num_neighbors      = null,
    neighbor_a         = null,
    neighbor_b         = null,
    balltree_leaf_size = null,
    similarity_type    = "nn",
)
