@include "atac_rna/_sc_atac_gex_analyzer_stages.mro"

call PARSE_REDUCED_DIM(
    linkage_projection = null,
    reduced_data       = {
        atac: {
            method:     "lsa",
            num_dims:   15,
            projection: "/home/benjames/data4/10X/pbmc_granulocyte_sorted_10k/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_SC_ATAC_GEX_ANALYZER/_DIMENSION_REDUCER/_ATAC_DIMENSION_REDUCER/REDUCE_DIMENSIONS/fork0/join-u3b7f6eb8a8/files/reduced_data",
        },
        atac_gex: null,
        gex: {
            method:     "pca",
            num_dims:   10,
            projection: "/home/benjames/data4/10X/pbmc_granulocyte_sorted_10k/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_SC_ATAC_GEX_ANALYZER/_DIMENSION_REDUCER/_GEX_DIMENSION_REDUCER/REDUCE_DIMENSIONS/fork0/join-u3b7f6eb8a8/files/reduced_data",
        },
    },
    matrix_h5          = "/home/benjames/data4/10X/pbmc_granulocyte_sorted_10k/SC_ATAC_GEX_COUNTER_CS/SC_ATAC_GEX_COUNTER/_JOINT_CELL_DETECTOR/MERGE_ATAC_RNA_MATRICES/fork0/join-u3b7f6eb558/files/atac_gex.h5",
)
