2023-12-05 18:03:06 [time] __start__
2023-12-05 18:03:06 [monitor] cgroup memory limit of 9223372036854771712 bytes detected
2023-12-05 18:03:07 [info] genomes = ['GRCh38']
2023-12-05 18:03:11 [info] GEX matrix = (36601, 491515), ATAC matrix = (134030, 621221)
2023-12-05 18:03:13 [info] parameters: {
    "GRCh38": {
        "rna": {
            "ordmag_threshold": 4017.401999999988,
            "centroid_initial": [
                32.48900848676035,
                10385.363510988325
            ],
            "centroid_final": [
                12.207787596287554,
                6580.743055694681
            ],
            "force_cells_min_count": NaN
        },
        "atac": {
            "ordmag_threshold": 10255.715999999993,
            "centroid_initial": [
                173.0149312372295,
                29014.56885722264
            ],
            "centroid_final": [
                75.74780158995847,
                18003.147537996243
            ],
            "force_cells_min_count": NaN
        }
    }
}
2023-12-05 18:03:17 [info] Writing out cell barcodes
2023-12-05 18:03:17 [info] Selected 3233 barcodes of species GRCh38
2023-12-05 18:03:17 [time] __end__
