PLINK v1.90a 64-bit (27 Mar 2014)
7 arguments: --bfile nam_fwd_cleaned_hg19 --keep nat.keep --make-bed --out nam_fwd_cleaned_hg19_ref
Hostname: scg3-ln01.local
Working directory: /srv/gs1/projects/bustamante/armartin_projects/rare_imputation/chip_collab/admixed/NATAM
Start time: Thu May  1 14:15:55 2014

24146 MB RAM detected; reserving 12073 MB for main workspace.
Allocated 2864 MB successfully, after larger attempt(s) failed.
890346 variants and 88 people (0 males, 0 females, 88 ambiguous) loaded.
Ambiguous sex IDs written to nam_fwd_cleaned_hg19_ref.nosex.
Using 1 thread (no multithreaded calculations invoked).
Note: No phenotypes present.
Calculating allele frequencies... done.
Total genotyping rate in remaining individuals is 0.998605.
890346 variants and 43 people pass filters and QC.
--make-bed to nam_fwd_cleaned_hg19_ref.bed + .bim + .fam... done.

End time: Thu May  1 14:15:57 2014