Variant CNV_M2_HG19_7_76077338_76169053_7_76575577_76659693

Location: chr7:76077338-76169053 (91Kb), chr7:76575577-76659693 (84Kb), distance: 406Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.017

Genes Overlapped
DTX2 GENE protein deltex-2
UPK3B CDS uroplakin-3b isoform c precursor
UPK3B EXON uroplakin-3b isoform c precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	1	42	1	1
CEU	0	0	0	1	63	2	0
CHB	0	0	0	0	77	1	0
CHS	0	0	0	0	91	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	54	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	1	68	0	0
MXL	0	0	0	1	51	2	0
PUR	0	0	0	0	51	1	0
TSI	0	0	0	1	80	2	0
YRI	0	0	0	0	64	6	1

AFR	0	0	0	1	132	6	1
AFR+	0	0	0	2	174	7	2
AMR	0	0	0	1	151	3	0
ASN	0	0	0	0	237	1	0
EUR	0	0	0	2	265	4	0

ALL	0	0	0	5	827	15	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	1	42	1	0
CEU	0	0	0	1	63	2	0
CHB	0	0	0	0	77	1	0
CHS	0	0	0	0	90	0	0
CLM	0	0	0	0	48	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	53	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	68	0	0
LWK	0	0	0	0	65	0	0
MXL	0	0	0	0	51	2	0
PUR	0	0	0	0	51	1	0
TSI	0	0	0	1	80	0	0
YRI	0	0	0	0	63	3	1

AFR	0	0	0	0	128	3	1
AFR+	0	0	0	1	170	4	1
AMR	0	0	0	0	150	3	0
ASN	0	0	0	0	235	1	0
EUR	0	0	0	2	264	2	0

ALL	0	0	0	3	819	10	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI