Variant CNV_M2_HG19_15_23090899_23216152_15_28975297_29101685

Location: chr15:23090899-23216152 (125Kb), chr15:28975297-29101685 (126Kb), distance: 5.8Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.006

Genes Overlapped
GOLGA8M EXON NA
NIPA1 EXON magnesium transporter NIPA1 isoform 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	0	45	0
CEU	0	0	0	0	66	0
CHB	0	0	0	0	77	1
CHS	0	0	0	0	90	1
CLM	0	0	0	0	48	1
FIN	0	0	0	0	62	0
GBR	0	0	0	1	53	0
IBS	0	0	0	0	6	0
JPT	0	0	0	0	69	0
LWK	0	0	0	0	69	0
MXL	0	0	0	0	54	0
PUR	0	0	0	0	52	0
TSI	0	0	0	0	83	0
YRI	0	0	0	1	70	0

AFR	0	0	0	1	139	0
AFR+	0	0	0	1	184	0
AMR	0	0	0	0	154	1
ASN	0	0	0	0	236	2
EUR	0	0	0	1	270	0

ALL	0	0	0	2	844	3
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	0	45	0
CEU	0	0	0	0	66	0
CHB	0	0	0	0	77	1
CHS	0	0	0	0	89	1
CLM	0	0	0	0	47	1
FIN	0	0	0	0	62	0
GBR	0	0	0	1	53	0
IBS	0	0	0	0	6	0
JPT	0	0	0	0	69	0
LWK	0	0	0	0	68	0
MXL	0	0	0	0	54	0
PUR	0	0	0	0	52	0
TSI	0	0	0	0	83	0
YRI	0	0	0	1	70	0

AFR	0	0	0	1	138	0
AFR+	0	0	0	1	183	0
AMR	0	0	0	0	153	1
ASN	0	0	0	0	235	2
EUR	0	0	0	1	270	0

ALL	0	0	0	2	841	3
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI